Functional Imaging

Tutorials about processing functional MRI data

Using fmriprep with neurodesk on an HPC

A brief guide to using fmriprep with neurodesk, using data from the STRIAVISE project.

Using mriqc with neurodesk on HPC

A brief guide to using mriqc with neurodesk, using data from the STRIAVISE project.

PhysIO

Example workflow for the PhysIO Toolbox

A batch scripting example for PhysIO toolbox

Follow this tutorial as an example of how to batch script for the PhysIO toolbox using Neurodesk.