Functional Imaging

Tutorials about processing functional MRI data

Connectome Workbench

A tutorial for accessing and visualizing the 7T HCP Retinotopy Dataset on Connectome Workbench.

Using fmriprep with neurodesk on an HPC

A brief guide to using fmriprep with neurodesk

Using mriqc with neurodesk on HPC

A brief guide to using mriqc with neurodesk.

PhysIO

Example workflow for the PhysIO Toolbox

A batch scripting example for PhysIO toolbox

Follow this tutorial as an example of how to batch script for the PhysIO toolbox using Neurodesk.

Statistical Parametric Mapping (SPM)

A tutorial for running a functional MRI analysis in SPM.

Last modified April 12, 2024: remove links (ae00479)